Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Irf8P23611 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.14■□□□□ 0.17
Irf8P23611 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
Irf8P23611 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Irf8P23611 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.13■□□□□ 0.17
Irf8P23611 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Irf8P23611 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Irf8P23611 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Irf8P23611 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Irf8P23611 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Irf8P23611 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Efs-202ENSMUST00000227037 2540 ntBASIC16.12■□□□□ 0.17
Irf8P23611 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Irf8P23611 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Gm8749-201ENSMUST00000117737 331 ntBASIC16.12■□□□□ 0.17
Irf8P23611 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Gm17271-201ENSMUST00000165535 355 ntBASIC16.12■□□□□ 0.17
Irf8P23611 Rpph1-201ENSMUST00000175096 319 ntBASIC16.12■□□□□ 0.17
Irf8P23611 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.12■□□□□ 0.17
Irf8P23611 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.12■□□□□ 0.17
Irf8P23611 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.12■□□□□ 0.17
Irf8P23611 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Irf8P23611 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Irf8P23611 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Irf8P23611 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Irf8P23611 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Irf8P23611 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.11■□□□□ 0.17
Irf8P23611 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.11■□□□□ 0.17
Irf8P23611 Gm13464-201ENSMUST00000119418 935 ntBASIC16.11■□□□□ 0.17
Irf8P23611 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.11■□□□□ 0.17
Irf8P23611 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.11■□□□□ 0.17
Irf8P23611 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.11■□□□□ 0.17
Irf8P23611 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Irf8P23611 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.11■□□□□ 0.17
Irf8P23611 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.11■□□□□ 0.17
Irf8P23611 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.11■□□□□ 0.17
Irf8P23611 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Irf8P23611 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms