Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Kcna1P16388 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Kcna1P16388 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Kcna1P16388 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Kcna1P16388 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.98■□□□□ 0.31
Kcna1P16388 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.98■□□□□ 0.31
Kcna1P16388 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Kcna1P16388 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.98■□□□□ 0.31
Kcna1P16388 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.98■□□□□ 0.31
Kcna1P16388 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.98■□□□□ 0.31
Kcna1P16388 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Efs-202ENSMUST00000227037 2540 ntBASIC16.98■□□□□ 0.31
Kcna1P16388 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Kcna1P16388 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.97■□□□□ 0.31
Kcna1P16388 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 Gm44487-201ENSMUST00000205145 325 ntBASIC16.97■□□□□ 0.31
Kcna1P16388 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Kcna1P16388 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Kcna1P16388 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Kcna1P16388 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.97■□□□□ 0.31
Kcna1P16388 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Kcna1P16388 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Kcna1P16388 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.96■□□□□ 0.31
Kcna1P16388 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.96■□□□□ 0.31
Kcna1P16388 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Kcna1P16388 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.96■□□□□ 0.31
Kcna1P16388 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Kcna1P16388 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Kcna1P16388 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Kcna1P16388 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.96■□□□□ 0.31
Kcna1P16388 Mir1895-201ENSMUST00000122615 79 ntBASIC16.96■□□□□ 0.31
Kcna1P16388 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.96■□□□□ 0.31
Kcna1P16388 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.96■□□□□ 0.31
Kcna1P16388 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.96■□□□□ 0.31
Kcna1P16388 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Kcna1P16388 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Kcna1P16388 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Kcna1P16388 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Kcna1P16388 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Kcna1P16388 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Kcna1P16388 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Kcna1P16388 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Kcna1P16388 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Kcna1P16388 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.95■□□□□ 0.3
Kcna1P16388 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Kcna1P16388 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Kcna1P16388 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms