Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.25■□□□□ 0.35
Sema3fO88632 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.25■□□□□ 0.35
Sema3fO88632 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sema3fO88632 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.25■□□□□ 0.35
Sema3fO88632 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.25■□□□□ 0.35
Sema3fO88632 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.25■□□□□ 0.35
Sema3fO88632 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.25■□□□□ 0.35
Sema3fO88632 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sema3fO88632 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sema3fO88632 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sema3fO88632 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sema3fO88632 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.24■□□□□ 0.35
Sema3fO88632 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Gm15693-201ENSMUST00000120470 637 ntBASIC17.24■□□□□ 0.35
Sema3fO88632 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sema3fO88632 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.24■□□□□ 0.35
Sema3fO88632 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sema3fO88632 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.24■□□□□ 0.35
Sema3fO88632 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sema3fO88632 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sema3fO88632 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sema3fO88632 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.23■□□□□ 0.35
Sema3fO88632 Gm11543-201ENSMUST00000120758 370 ntBASIC17.23■□□□□ 0.35
Sema3fO88632 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Gm38294-201ENSMUST00000192831 381 ntBASIC17.23■□□□□ 0.35
Sema3fO88632 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sema3fO88632 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sema3fO88632 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sema3fO88632 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sema3fO88632 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sema3fO88632 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sema3fO88632 Gm13223-201ENSMUST00000118609 747 ntBASIC17.22■□□□□ 0.35
Sema3fO88632 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.22■□□□□ 0.35
Sema3fO88632 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.22■□□□□ 0.35
Sema3fO88632 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sema3fO88632 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.22■□□□□ 0.35
Sema3fO88632 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms