Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
KLHL41O60662 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.81■□□□□ 0.44
KLHL41O60662 TSPY5P-201ENST00000426936 936 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.81■□□□□ 0.44
KLHL41O60662 AC008040.2-201ENST00000461049 708 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.81■□□□□ 0.44
KLHL41O60662 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 AC140113.3-201ENST00000605663 199 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 AL023803.3-201ENST00000615559 522 ntBASIC17.81■□□□□ 0.44
KLHL41O60662 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KLHL41O60662 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KLHL41O60662 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL41O60662 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KLHL41O60662 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.81■□□□□ 0.44
KLHL41O60662 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KLHL41O60662 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 AC006116.8-202ENST00000587620 1550 ntBASIC17.8■□□□□ 0.44
KLHL41O60662 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 AC117947.1-201ENST00000427448 529 ntBASIC17.8■□□□□ 0.44
KLHL41O60662 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.8■□□□□ 0.44
KLHL41O60662 AC141257.4-201ENST00000634557 245 ntBASIC17.8■□□□□ 0.44
KLHL41O60662 AC136944.6-201ENST00000634818 245 ntBASIC17.8■□□□□ 0.44
KLHL41O60662 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KLHL41O60662 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 AC084018.2-201ENST00000613093 2607 ntBASIC17.8■□□□□ 0.44
KLHL41O60662 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KLHL41O60662 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KLHL41O60662 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KLHL41O60662 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KLHL41O60662 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KLHL41O60662 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.79■□□□□ 0.44
KLHL41O60662 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.79■□□□□ 0.44
KLHL41O60662 CKBP1-201ENST00000565489 1086 ntBASIC17.79■□□□□ 0.44
KLHL41O60662 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.79■□□□□ 0.44
KLHL41O60662 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
KLHL41O60662 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.79■□□□□ 0.44
KLHL41O60662 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.79■□□□□ 0.44
KLHL41O60662 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHL41O60662 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHL41O60662 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms