Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Stag2O35638 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stag2O35638 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stag2O35638 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.14■□□□□ 0.33
Stag2O35638 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.14■□□□□ 0.33
Stag2O35638 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Stag2O35638 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.14■□□□□ 0.33
Stag2O35638 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag2O35638 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Gm6973-201ENSMUST00000117080 721 ntBASIC17.13■□□□□ 0.33
Stag2O35638 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.13■□□□□ 0.33
Stag2O35638 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Stag2O35638 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stag2O35638 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.13■□□□□ 0.33
Stag2O35638 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag2O35638 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.12■□□□□ 0.33
Stag2O35638 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.12■□□□□ 0.33
Stag2O35638 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stag2O35638 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Gm18889-201ENSMUST00000174284 929 ntBASIC17.12■□□□□ 0.33
Stag2O35638 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Stag2O35638 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Stag2O35638 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag2O35638 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Sybu-209ENSMUST00000228639 4113 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Stag2O35638 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.11■□□□□ 0.33
Stag2O35638 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Rprl2-201ENSMUST00000157150 290 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.11■□□□□ 0.33
Stag2O35638 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 Gm18057-201ENSMUST00000208220 503 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.11■□□□□ 0.33
Stag2O35638 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag2O35638 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Stag2O35638 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms