Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Gm18246-201ENSMUST00000221023 728 ntBASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-2A0N8N6 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm7153-201ENSMUST00000117092 455 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm4899-201ENSMUST00000178708 719 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 AV026068-213ENSMUST00000223675 1171 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm10819-201ENSMUST00000099988 561 ntBASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-2A0N8N6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Gm10060-201ENSMUST00000212002 111 ntBASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-2A0N8N6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms