Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gm43767-201ENSMUST00000198933 381 ntBASIC14.38□□□□□ -0.11
Vps29Q9QZ88 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Gm5864-201ENSMUST00000202263 970 ntBASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps29Q9QZ88 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Vps29Q9QZ88 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps29Q9QZ88 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms