Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm4459-201ENSMUST00000118750 468 ntBASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm12497-201ENSMUST00000138778 237 ntBASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim39Q9ESN2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim39Q9ESN2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim39Q9ESN2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms