Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Mir449b-201ENSMUST00000104833 80 ntBASIC17.32■□□□□ 0.36
Smc1bQ920F6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm12428-201ENSMUST00000119844 727 ntBASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.32■□□□□ 0.36
Smc1bQ920F6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Smc1bQ920F6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.31■□□□□ 0.36
Smc1bQ920F6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc1bQ920F6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.3■□□□□ 0.36
Smc1bQ920F6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Gm27430-201ENSMUST00000184585 107 ntBASIC17.3■□□□□ 0.36
Smc1bQ920F6 Gm44333-201ENSMUST00000197168 107 ntBASIC17.3■□□□□ 0.36
Smc1bQ920F6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.3■□□□□ 0.36
Smc1bQ920F6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.3■□□□□ 0.36
Smc1bQ920F6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc1bQ920F6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.29■□□□□ 0.36
Smc1bQ920F6 Gm27622-201ENSMUST00000183779 60 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms