Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Gm8835-201ENSMUST00000173096 1169 ntBASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx54Q8K4L0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx54Q8K4L0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx54Q8K4L0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx54Q8K4L0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Mir1247-201ENSMUST00000116706 82 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Gm15678-201ENSMUST00000117573 960 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Olfr582-201ENSMUST00000098212 960 ntBASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx54Q8K4L0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Gm12390-201ENSMUST00000117897 397 ntBASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.5■□□□□ 0.71
Ddx54Q8K4L0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Gm42693-201ENSMUST00000196779 631 ntBASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Gm45453-201ENSMUST00000211758 853 ntBASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx54Q8K4L0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms