Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hist3h2bbQ8CGP0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
Hist3h2bbQ8CGP0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hist3h2bbQ8CGP0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hist3h2bbQ8CGP0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm9988-201ENSMUST00000069786 435 ntBASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hist3h2bbQ8CGP0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hist3h2bbQ8CGP0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms