Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc38Q8CDN8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Gm11764-201ENSMUST00000120221 623 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Gm7230-201ENSMUST00000173026 815 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Gm43767-201ENSMUST00000198933 381 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc38Q8CDN8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc38Q8CDN8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Gm17971-201ENSMUST00000190239 806 ntBASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms