Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dhx40Q6PE54 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm8097-201ENSMUST00000117903 829 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm10499-201ENSMUST00000174094 934 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Dhx40Q6PE54 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Gm15372-201ENSMUST00000120729 834 ntBASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Dhx40Q6PE54 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms