Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm2810-201ENSMUST00000118681 990 ntBASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rc3h1Q4VGL6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm27920-201ENSMUST00000183953 96 ntBASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm5779-201ENSMUST00000218467 910 ntBASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rc3h1Q4VGL6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm25287-201ENSMUST00000103846 110 ntBASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm22918-201ENSMUST00000103855 110 ntBASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm7774-201ENSMUST00000200064 533 ntBASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm44872-201ENSMUST00000207864 420 ntBASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms