Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm24169-201ENSMUST00000180244 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm23689-201ENSMUST00000180354 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm27359-201ENSMUST00000184153 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm27785-201ENSMUST00000184268 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm27466-201ENSMUST00000184396 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm27703-201ENSMUST00000184836 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.25■□□□□ 0.19
CiitaP79621 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.25■□□□□ 0.19
CiitaP79621 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
CiitaP79621 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CiitaP79621 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.24■□□□□ 0.19
CiitaP79621 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CiitaP79621 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
CiitaP79621 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.24■□□□□ 0.19
CiitaP79621 Gm2810-201ENSMUST00000118681 990 ntBASIC16.24■□□□□ 0.19
CiitaP79621 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CiitaP79621 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.24■□□□□ 0.19
CiitaP79621 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.24■□□□□ 0.19
CiitaP79621 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.24■□□□□ 0.19
CiitaP79621 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.24■□□□□ 0.19
CiitaP79621 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CiitaP79621 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.23■□□□□ 0.19
CiitaP79621 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.23■□□□□ 0.19
CiitaP79621 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.23■□□□□ 0.19
CiitaP79621 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.23■□□□□ 0.19
CiitaP79621 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CiitaP79621 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CiitaP79621 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CiitaP79621 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CiitaP79621 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CiitaP79621 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CiitaP79621 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.22■□□□□ 0.19
CiitaP79621 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CiitaP79621 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms