Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rps28P62858 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.84□□□□□ -0.99
Rps28P62858 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC8.84□□□□□ -0.99
Rps28P62858 Gm30437-201ENSMUST00000206086 1201 ntBASIC8.84□□□□□ -0.99
Rps28P62858 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rps28P62858 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 Gm10176-201ENSMUST00000159707 2264 ntBASIC8.84□□□□□ -0.99
Rps28P62858 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Rps28P62858 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rps28P62858 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Gm6085-201ENSMUST00000182774 1470 ntBASIC8.83□□□□□ -1
Rps28P62858 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rps28P62858 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC8.83□□□□□ -1
Rps28P62858 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC8.83□□□□□ -1
Rps28P62858 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rps28P62858 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 AC122840.1-201ENSMUST00000220915 3334 ntBASIC8.83□□□□□ -1
Rps28P62858 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Rps28P62858 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rps28P62858 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC8.83□□□□□ -1
Rps28P62858 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC8.83□□□□□ -1
Rps28P62858 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC8.83□□□□□ -1
Rps28P62858 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 AC115735.4-201ENSMUST00000227460 1944 ntBASIC8.83□□□□□ -1
Rps28P62858 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rps28P62858 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 AC121801.1-201ENSMUST00000225363 1899 ntBASIC8.83□□□□□ -1
Rps28P62858 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rps28P62858 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC8.82□□□□□ -1
Rps28P62858 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC8.82□□□□□ -1
Rps28P62858 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rps28P62858 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rps28P62858 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rps28P62858 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rps28P62858 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rps28P62858 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms