Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Strn4P58404 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Strn4P58404 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Strn4P58404 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Strn4P58404 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Strn4P58404 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Strn4P58404 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Strn4P58404 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Strn4P58404 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.85■□□□□ 0.61
Strn4P58404 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Strn4P58404 Gm13015-201ENSMUST00000118674 204 ntBASIC18.85■□□□□ 0.61
Strn4P58404 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.85■□□□□ 0.61
Strn4P58404 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Strn4P58404 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Strn4P58404 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Strn4P58404 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Strn4P58404 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.84■□□□□ 0.61
Strn4P58404 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Strn4P58404 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Strn4P58404 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Strn4P58404 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Strn4P58404 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Strn4P58404 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.83■□□□□ 0.6
Strn4P58404 Gm27306-201ENSMUST00000183970 107 ntBASIC18.83■□□□□ 0.6
Strn4P58404 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 Gm29541-201ENSMUST00000191351 678 ntBASIC18.83■□□□□ 0.6
Strn4P58404 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.83■□□□□ 0.6
Strn4P58404 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Strn4P58404 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Strn4P58404 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Strn4P58404 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.83■□□□□ 0.6
Strn4P58404 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.82■□□□□ 0.6
Strn4P58404 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Strn4P58404 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Strn4P58404 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.82■□□□□ 0.6
Strn4P58404 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Strn4P58404 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.82■□□□□ 0.6
Strn4P58404 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Strn4P58404 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Strn4P58404 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Strn4P58404 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Strn4P58404 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Strn4P58404 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms