Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cdkn2bP55271 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.39□□□□□ -0.11
Cdkn2bP55271 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdkn2bP55271 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.38□□□□□ -0.11
Cdkn2bP55271 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
Cdkn2bP55271 Gm11780-201ENSMUST00000136880 516 ntBASIC14.38□□□□□ -0.11
Cdkn2bP55271 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn2bP55271 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.37□□□□□ -0.11
Cdkn2bP55271 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.37□□□□□ -0.11
Cdkn2bP55271 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn2bP55271 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms