Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm43575-201ENSMUST00000196420 516 ntBASIC13.38□□□□□ -0.27
P06344 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
P06344 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.38□□□□□ -0.27
P06344 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.38□□□□□ -0.27
P06344 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
P06344 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
P06344 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P06344 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
P06344 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.37□□□□□ -0.27
P06344 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.37□□□□□ -0.27
P06344 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
P06344 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
P06344 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
P06344 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.37□□□□□ -0.27
P06344 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.37□□□□□ -0.27
P06344 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P06344 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
P06344 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.37□□□□□ -0.27
P06344 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.37□□□□□ -0.27
P06344 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P06344 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
P06344 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.37□□□□□ -0.27
P06344 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.36□□□□□ -0.27
P06344 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P06344 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Gm23935-201ENSMUST00000102303 57 ntBASIC13.36□□□□□ -0.27
P06344 Gm24270-201ENSMUST00000102326 57 ntBASIC13.36□□□□□ -0.27
P06344 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P06344 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
P06344 Gm15427-201ENSMUST00000117288 531 ntBASIC13.36□□□□□ -0.27
P06344 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.36□□□□□ -0.27
P06344 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.36□□□□□ -0.27
P06344 Gm24245-201ENSMUST00000157318 57 ntBASIC13.36□□□□□ -0.27
P06344 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.36□□□□□ -0.27
P06344 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.36□□□□□ -0.27
P06344 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P06344 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.36□□□□□ -0.27
P06344 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P06344 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
P06344 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P06344 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P06344 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
P06344 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P06344 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P06344 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P06344 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P06344 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms