Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.21□□□□□ -0.29
P04224 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P04224 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.21□□□□□ -0.29
P04224 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
P04224 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.21□□□□□ -0.29
P04224 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.21□□□□□ -0.29
P04224 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.21□□□□□ -0.29
P04224 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P04224 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
P04224 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
P04224 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04224 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P04224 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
P04224 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.2□□□□□ -0.3
P04224 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.2□□□□□ -0.3
P04224 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.2□□□□□ -0.3
P04224 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.2□□□□□ -0.3
P04224 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Gm43799-201ENSMUST00000201845 579 ntBASIC13.2□□□□□ -0.3
P04224 Gm44430-201ENSMUST00000203376 995 ntBASIC13.2□□□□□ -0.3
P04224 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.2□□□□□ -0.3
P04224 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.2□□□□□ -0.3
P04224 Gm21559-201ENSMUST00000220638 855 ntBASIC13.2□□□□□ -0.3
P04224 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Gm8587-201ENSMUST00000076538 843 ntBASIC13.2□□□□□ -0.3
P04224 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
P04224 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.2□□□□□ -0.3
P04224 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04224 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
P04224 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
P04224 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
P04224 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.19□□□□□ -0.3
P04224 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
P04224 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.19□□□□□ -0.3
P04224 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.19□□□□□ -0.3
P04224 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
P04224 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.19□□□□□ -0.3
P04224 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.19□□□□□ -0.3
P04224 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.19□□□□□ -0.3
P04224 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms