Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm7775-201ENSMUST00000218871 853 ntBASIC16.51■□□□□ 0.23
Prom1O54990 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.51■□□□□ 0.23
Prom1O54990 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.51■□□□□ 0.23
Prom1O54990 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.51■□□□□ 0.23
Prom1O54990 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.51■□□□□ 0.23
Prom1O54990 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.5■□□□□ 0.23
Prom1O54990 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.5■□□□□ 0.23
Prom1O54990 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.5■□□□□ 0.23
Prom1O54990 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.5■□□□□ 0.23
Prom1O54990 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Prom1O54990 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prom1O54990 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Prom1O54990 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
Prom1O54990 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prom1O54990 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Prom1O54990 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Prom1O54990 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Gm16215-201ENSMUST00000161990 637 ntBASIC16.49■□□□□ 0.23
Prom1O54990 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prom1O54990 Gm44855-201ENSMUST00000205725 362 ntBASIC16.49■□□□□ 0.23
Prom1O54990 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prom1O54990 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.48■□□□□ 0.23
Prom1O54990 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Prom1O54990 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Prom1O54990 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Prom1O54990 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.48■□□□□ 0.23
Prom1O54990 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.48■□□□□ 0.23
Prom1O54990 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Mir7684-201ENSMUST00000183858 60 ntBASIC16.48■□□□□ 0.23
Prom1O54990 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Prom1O54990 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.48■□□□□ 0.23
Prom1O54990 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prom1O54990 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.48■□□□□ 0.23
Prom1O54990 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.48■□□□□ 0.23
Prom1O54990 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prom1O54990 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Prom1O54990 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.47■□□□□ 0.23
Prom1O54990 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Prom1O54990 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms