Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Gm18889-201ENSMUST00000174284 929 ntBASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Gm44335-201ENSMUST00000196879 141 ntBASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Gm44297-201ENSMUST00000198304 141 ntBASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Gm44346-201ENSMUST00000198851 141 ntBASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb9E9Q5G2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb9E9Q5G2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Mir6990-201ENSMUST00000183724 91 ntBASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb9E9Q5G2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms