Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm715-201ENSMUST00000117865 831 ntBASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm2274-201ENSMUST00000184539 609 ntBASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm9987-201ENSMUST00000069768 567 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-3A0A0B4J1H2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm19164-201ENSMUST00000210667 640 ntBASIC11.68□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms