Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav16A0A075B653 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Gm7889-201ENSMUST00000185591 958 ntBASIC11.63□□□□□ -0.55
Trav16A0A075B653 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.63□□□□□ -0.55
Trav16A0A075B653 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16A0A075B653 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.62□□□□□ -0.55
Trav16A0A075B653 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.62□□□□□ -0.55
Trav16A0A075B653 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16A0A075B653 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Gm22697-201ENSMUST00000175194 63 ntBASIC11.61□□□□□ -0.55
Trav16A0A075B653 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Gm29257-201ENSMUST00000186115 639 ntBASIC11.61□□□□□ -0.55
Trav16A0A075B653 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms