Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx9Q9WUH2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Lhx9Q9WUH2 Gm13365-201ENSMUST00000121188 973 ntBASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Gm44872-201ENSMUST00000207864 420 ntBASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx9Q9WUH2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx9Q9WUH2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms