Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm8097-201ENSMUST00000117903 829 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm4535-201ENSMUST00000182274 558 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Mir8098-201ENSMUST00000184011 137 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm28659-201ENSMUST00000188013 759 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm10355-201ENSMUST00000097146 517 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RpgrQ9R0X5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.3■□□□□ 0.04
RpgrQ9R0X5 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RpgrQ9R0X5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Gm18195-201ENSMUST00000207604 706 ntBASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Gm6376-201ENSMUST00000209407 580 ntBASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms