Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp5Q9D7S9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp5Q9D7S9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Gm15358-201ENSMUST00000119249 520 ntBASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp5Q9D7S9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp5Q9D7S9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Gm8655-201ENSMUST00000221159 852 ntBASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms