Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm23935-201ENSMUST00000102303 57 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm24270-201ENSMUST00000102326 57 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm24245-201ENSMUST00000157318 57 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm16107-201ENSMUST00000162523 862 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Gm14201-201ENSMUST00000117627 289 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.17■□□□□ 0.02
Retreg3Q9CQV4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Efs-202ENSMUST00000227037 2540 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 AC154828.2-201ENSMUST00000220908 1070 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retreg3Q9CQV4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retreg3Q9CQV4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retreg3Q9CQV4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms