Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gm18246-201ENSMUST00000221023 728 ntBASIC13.19□□□□□ -0.3
Scrt1Q99M85 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.19□□□□□ -0.3
Scrt1Q99M85 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.18□□□□□ -0.3
Scrt1Q99M85 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gm12151-201ENSMUST00000121374 290 ntBASIC13.18□□□□□ -0.3
Scrt1Q99M85 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Rpph1-201ENSMUST00000175096 319 ntBASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scrt1Q99M85 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 Gm19164-201ENSMUST00000210667 640 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 App-207ENSMUST00000227737 2827 ntBASIC13.17□□□□□ -0.3
Scrt1Q99M85 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms