Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam20bQ8VCS3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam20bQ8VCS3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam20bQ8VCS3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam20bQ8VCS3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fam20bQ8VCS3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam20bQ8VCS3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms