Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Gm9727-201ENSMUST00000161387 555 ntBASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.31■□□□□ 0.04
Sfr1Q8BP27 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Gm18246-201ENSMUST00000221023 728 ntBASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sfr1Q8BP27 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.3■□□□□ 0.04
Sfr1Q8BP27 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.3■□□□□ 0.04
Sfr1Q8BP27 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sfr1Q8BP27 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms