Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tgfbr1Q64729 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tgfbr1Q64729 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tgfbr1Q64729 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tgfbr1Q64729 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms