Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Gm17837-201ENSMUST00000186435 985 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-2Q5R1I4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Mir6977-201ENSMUST00000184960 64 ntBASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-2Q5R1I4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-2Q5R1I4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gm27618-201ENSMUST00000183671 60 ntBASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms