Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Mir6404-201ENSMUST00000183699 94 ntBASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1d1Q3UV55 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Nr1d1Q3UV55 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Gm18206-201ENSMUST00000207027 926 ntBASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1d1Q3UV55 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1d1Q3UV55 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Nr1d1Q3UV55 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms