Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm28033-201ENSMUST00000184224 96 ntBASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13□□□□□ -0.33
Shisa3Q3UPR0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13□□□□□ -0.33
Shisa3Q3UPR0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 AC160980.1-201ENSMUST00000224136 970 ntBASIC13□□□□□ -0.33
Shisa3Q3UPR0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa3Q3UPR0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa3Q3UPR0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gm13312-201ENSMUST00000119631 718 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms