Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.04□□□□□ -0.32
Atf1P81269 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Atf1P81269 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.04□□□□□ -0.32
Atf1P81269 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atf1P81269 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atf1P81269 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.03□□□□□ -0.32
Atf1P81269 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.03□□□□□ -0.32
Atf1P81269 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Gm34391-201ENSMUST00000203706 907 ntBASIC13.03□□□□□ -0.32
Atf1P81269 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.03□□□□□ -0.32
Atf1P81269 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.03□□□□□ -0.32
Atf1P81269 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf1P81269 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Atf1P81269 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf1P81269 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.02□□□□□ -0.32
Atf1P81269 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Atf1P81269 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atf1P81269 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Atf1P81269 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf1P81269 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf1P81269 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.02□□□□□ -0.32
Atf1P81269 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf1P81269 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Atf1P81269 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Atf1P81269 Gm25990-201ENSMUST00000102440 86 ntBASIC13.02□□□□□ -0.33
Atf1P81269 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.02□□□□□ -0.33
Atf1P81269 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.02□□□□□ -0.33
Atf1P81269 Gm9103-201ENSMUST00000119371 405 ntBASIC13.02□□□□□ -0.33
Atf1P81269 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.02□□□□□ -0.33
Atf1P81269 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.02□□□□□ -0.33
Atf1P81269 Gm27459-201ENSMUST00000184860 107 ntBASIC13.02□□□□□ -0.33
Atf1P81269 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Atf1P81269 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Atf1P81269 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf1P81269 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.01□□□□□ -0.33
Atf1P81269 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atf1P81269 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.01□□□□□ -0.33
Atf1P81269 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf1P81269 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf1P81269 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms