Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.22■□□□□ 0.51
GRIA1P42261 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 AC005521.1-201ENST00000393351 872 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 AC117947.1-201ENST00000427448 529 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 AL137013.1-201ENST00000432946 1228 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.22■□□□□ 0.51
GRIA1P42261 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 YBX1P2-201ENST00000489612 999 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 AC034232.1-201ENST00000506026 1064 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.22■□□□□ 0.51
GRIA1P42261 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
GRIA1P42261 AL136038.4-201ENST00000603606 1261 ntBASIC18.22■□□□□ 0.51
GRIA1P42261 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GRIA1P42261 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.22■□□□□ 0.51
GRIA1P42261 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
GRIA1P42261 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIA1P42261 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIA1P42261 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.21■□□□□ 0.51
GRIA1P42261 AC024563.2-201ENST00000603282 481 ntBASIC18.21■□□□□ 0.51
GRIA1P42261 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GRIA1P42261 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIA1P42261 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GRIA1P42261 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIA1P42261 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
GRIA1P42261 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
GRIA1P42261 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
GRIA1P42261 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GRIA1P42261 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.2■□□□□ 0.5
GRIA1P42261 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 AC211429.1-201ENST00000415277 523 ntBASIC18.2■□□□□ 0.5
GRIA1P42261 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.2■□□□□ 0.5
GRIA1P42261 KRT18P57-201ENST00000443599 1254 ntBASIC18.2■□□□□ 0.5
GRIA1P42261 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.2■□□□□ 0.5
GRIA1P42261 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 AC113404.2-201ENST00000507884 177 ntBASIC18.2■□□□□ 0.5
GRIA1P42261 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
GRIA1P42261 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
GRIA1P42261 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GRIA1P42261 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GRIA1P42261 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms