Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.44■□□□□ 0.38
Pde6aP27664 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6aP27664 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pde6aP27664 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6aP27664 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pde6aP27664 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pde6aP27664 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.43■□□□□ 0.38
Pde6aP27664 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.43■□□□□ 0.38
Pde6aP27664 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.43■□□□□ 0.38
Pde6aP27664 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.43■□□□□ 0.38
Pde6aP27664 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6aP27664 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pde6aP27664 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pde6aP27664 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pde6aP27664 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.42■□□□□ 0.38
Pde6aP27664 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pde6aP27664 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.42■□□□□ 0.38
Pde6aP27664 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
Pde6aP27664 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6aP27664 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6aP27664 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pde6aP27664 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.41■□□□□ 0.38
Pde6aP27664 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Gm15427-201ENSMUST00000117288 531 ntBASIC17.41■□□□□ 0.38
Pde6aP27664 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.41■□□□□ 0.38
Pde6aP27664 Gm11594-201ENSMUST00000122313 162 ntBASIC17.41■□□□□ 0.38
Pde6aP27664 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.41■□□□□ 0.38
Pde6aP27664 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6aP27664 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.4■□□□□ 0.38
Pde6aP27664 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 Sybu-209ENSMUST00000228639 4113 ntBASIC17.4■□□□□ 0.38
Pde6aP27664 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Pde6aP27664 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms