Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.09■□□□□ 0.49
VIMP08670 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.09■□□□□ 0.49
VIMP08670 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VIMP08670 Z85996.1-201ENST00000494644 937 ntBASIC18.09■□□□□ 0.49
VIMP08670 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VIMP08670 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.09■□□□□ 0.49
VIMP08670 PRSS44-201ENST00000515154 1146 ntBASIC18.09■□□□□ 0.49
VIMP08670 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.09■□□□□ 0.49
VIMP08670 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
VIMP08670 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 AL137784.2-201ENST00000607332 1000 ntBASIC18.09■□□□□ 0.49
VIMP08670 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
VIMP08670 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VIMP08670 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.09■□□□□ 0.49
VIMP08670 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.09■□□□□ 0.49
VIMP08670 AC105020.1-201ENST00000435356 2205 ntBASIC18.08■□□□□ 0.49
VIMP08670 AL162727.3-201ENST00000635661 2787 ntBASIC18.08■□□□□ 0.49
VIMP08670 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
VIMP08670 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.08■□□□□ 0.49
VIMP08670 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VIMP08670 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.08■□□□□ 0.49
VIMP08670 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VIMP08670 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.08■□□□□ 0.49
VIMP08670 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
VIMP08670 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.08■□□□□ 0.48
VIMP08670 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.08■□□□□ 0.48
VIMP08670 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.08■□□□□ 0.48
VIMP08670 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.08■□□□□ 0.48
VIMP08670 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VIMP08670 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VIMP08670 AL513477.1-201ENST00000602865 2407 ntBASIC18.08■□□□□ 0.48
VIMP08670 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.08■□□□□ 0.48
VIMP08670 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.08■□□□□ 0.48
VIMP08670 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.08■□□□□ 0.48
VIMP08670 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VIMP08670 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VIMP08670 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
VIMP08670 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VIMP08670 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
VIMP08670 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.07■□□□□ 0.48
VIMP08670 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 AC133963.1-201ENST00000504166 1679 ntBASIC18.07■□□□□ 0.48
VIMP08670 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 AC008741.2-201ENST00000612792 3115 ntBASIC18.07■□□□□ 0.48
VIMP08670 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.07■□□□□ 0.48
VIMP08670 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.07■□□□□ 0.48
VIMP08670 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.07■□□□□ 0.48
VIMP08670 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.07■□□□□ 0.48
VIMP08670 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.07■□□□□ 0.48
VIMP08670 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VIMP08670 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VIMP08670 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.07■□□□□ 0.48
VIMP08670 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VIMP08670 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VIMP08670 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VIMP08670 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.06■□□□□ 0.48
VIMP08670 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
VIMP08670 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VIMP08670 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.06■□□□□ 0.48
VIMP08670 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.06■□□□□ 0.48
VIMP08670 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms