Protein–RNA interactions for Protein: E9Q956

Mcmdc2, Minichromosome maintenance domain-containing protein 2, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcmdc2E9Q956 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mcmdc2E9Q956 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Gm4995-201ENSMUST00000117247 432 ntBASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mcmdc2E9Q956 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Gm15427-201ENSMUST00000117288 531 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Gm25911-201ENSMUST00000157621 56 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Rpph1-201ENSMUST00000175096 319 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Gm20553-201ENSMUST00000204205 844 ntBASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
Mcmdc2E9Q956 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mcmdc2E9Q956 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mcmdc2E9Q956 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mcmdc2E9Q956 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms