Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-9A0A140T8P4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm15358-201ENSMUST00000119249 520 ntBASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Igkv3-9A0A140T8P4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Grk6-207ENSMUST00000225925 2769 ntBASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-9A0A140T8P4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm4535-201ENSMUST00000182274 558 ntBASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.47□□□□□ -0.73
Igkv3-9A0A140T8P4 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms