Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm15794-201ENSMUST00000120182 631 ntBASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm25016-201ENSMUST00000158399 131 ntBASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms