Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm10499-201ENSMUST00000174094 934 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm5864-201ENSMUST00000202263 970 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Mir8098-201ENSMUST00000184011 137 ntBASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms