Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm12497-201ENSMUST00000138778 237 ntBASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm27357-201ENSMUST00000183754 135 ntBASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm15372-201ENSMUST00000120729 834 ntBASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Gm27867-201ENSMUST00000184778 125 ntBASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ighv1-11A0A0A6YWI9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms