Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ap4s1Q9WVL1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.46□□□□□ -0.09
Ap4s1Q9WVL1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.46□□□□□ -0.09
Ap4s1Q9WVL1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap4s1Q9WVL1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap4s1Q9WVL1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ap4s1Q9WVL1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Gm13436-201ENSMUST00000120418 567 ntBASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap4s1Q9WVL1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap4s1Q9WVL1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap4s1Q9WVL1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms