Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Gm37153-201ENSMUST00000193637 231 ntBASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.9□□□□□ -0.18
ClcnkaQ9WUB7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ClcnkaQ9WUB7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ClcnkaQ9WUB7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ClcnkaQ9WUB7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Gm7461-201ENSMUST00000058918 827 ntBASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClcnkaQ9WUB7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm18489-201ENSMUST00000172565 551 ntBASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ClcnkaQ9WUB7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
ClcnkaQ9WUB7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms