Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.75□□□□□ -0.53
CcsQ9WU84 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.75□□□□□ -0.53
CcsQ9WU84 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gm17808-201ENSMUST00000200859 894 ntBASIC11.75□□□□□ -0.53
CcsQ9WU84 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.75□□□□□ -0.53
CcsQ9WU84 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.75□□□□□ -0.53
CcsQ9WU84 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcsQ9WU84 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
CcsQ9WU84 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Gm11950-201ENSMUST00000121615 838 ntBASIC11.74□□□□□ -0.53
CcsQ9WU84 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.74□□□□□ -0.53
CcsQ9WU84 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CcsQ9WU84 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcsQ9WU84 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms