Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1eQ9CZQ6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1eQ9CZQ6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1eQ9CZQ6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Raet1eQ9CZQ6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms