Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.74■□□□□ 0.43
Smc3Q9CW03 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.74■□□□□ 0.43
Smc3Q9CW03 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.74■□□□□ 0.43
Smc3Q9CW03 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smc3Q9CW03 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Gm27646-201ENSMUST00000183989 110 ntBASIC17.73■□□□□ 0.43
Smc3Q9CW03 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.73■□□□□ 0.43
Smc3Q9CW03 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc3Q9CW03 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.72■□□□□ 0.43
Smc3Q9CW03 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.72■□□□□ 0.43
Smc3Q9CW03 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gm6296-201ENSMUST00000222599 943 ntBASIC17.72■□□□□ 0.43
Smc3Q9CW03 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc3Q9CW03 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms