Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.61□□□□□ -0.07
Rdh1Q8CGV4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Rdh1Q8CGV4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Gm13616-201ENSMUST00000120600 222 ntBASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rdh1Q8CGV4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.58□□□□□ -0.07
Rdh1Q8CGV4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.58□□□□□ -0.08
Rdh1Q8CGV4 Gm15483-201ENSMUST00000120338 456 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms